I'm a first-year Ph.D. student in Computer Science at , advised by Prof. . Previsouly, I obtained M.S. in Biomedical Engineering from , working with Prof. and Prof. . I was a visiting research fellow in the , working with Prof. . Before joining , I received B.S. in Computer Science from the at , where I was privileged to work with Prof. and Dr. .

CV shixuangu@g.harvard.edu

Research Topics

My research interest lies in geometric deep learning with applications in biomedical image analysis. My latest research focuses on 3D registration and reconstruction in [ PyTC] and rib analysis. I also build robots for competition events and medical usage. [Check the robots I built. ]


[09/2023] RibSeg v2 is accecpted by IEEE TMI.
[06/2023] One paper on neuron growth simulation is accecpted by CMAME.
[05/2023] Graduated from CMU.
[03/2023] I'll be joining Harvard as a Ph.D. student this fall.


* indicates equal contribution.

RibFrac Challenge: Rib Fracture Detection, Segmentation and Classification from CT Scans
*, Rui Shi*, Liang Jin, Xiaoyang Huang, , , , Youjun E, Jiaqi Zhang, Jianying Liu, Pengfei Liu, Zhizhong Chai, Yongjie Xiao, Hao Chen, Liming Xu, Bang Du, Xiangyi Yan, Hao Tang, Adam Alessio, Gregory Holste, Jiapeng Zhang, Xiaoming Wang, Jianye He, Lixuan Che, , ,
IEEE Transactions on Medical Imaging (IEEE TMI), 2023, (under review)

FreSeg: Frenet-Frame-based Part Segmentation for 3D Curvilinear Structures
, , , , , , , ,
manuscript in preparation

RibSeg v2: A Large-scale Benchmark for Rib Labeling and Anatomical Centerline Extraction
Liang Jin*, *, , , , , , , ,
IEEE Transactions on Medical Imaging (IEEE TMI), 2023

Biomimetic IGA neuron growth model with neurite morphometric features and CNN-based prediction
, , , ,
Computer Methods in Applied Mechanics and Engineering (CMAME), 2023

RibSeg Dataset and Strong Point Cloud Baselines for Rib Segmentation from CT Scans
*, *, , ,
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021



[2018 - 2020] SJTU-VEX Robotics Project [Check the events here.]
Advisor: Prof.
I'm one of the founding members of the SJTU VEX Lab, and I have been designing, building, and programming robots for over two years, competing for VEX U robotics world tournaments.


[2021] Biomedical Engineering Department Head's Fellowship
College of Engineering,
[2021] Outstanding Graduate of Shanghai Jiao Tong University

[2018] Create Award, Robot Skills Finalist, and Silver Award
2018 12th Asia-Pacific Robotics Championship, Asian Robotics League

[2018] Leading Student Ambassador, Excellent Student Presentation Award
[2016] First Prize and Best Con in Shanghai ( Shanghai)
Shanghai Physical Society, China


Teaching Assistant @ : Artificial Intelligence and Data Science (COM SCI - 960.01: Aug'21), Research Methodologies (ENGL 902: Aug'21), Academic Writing (ENGL 901: Aug'21).
Tools: Python, Pytorch, C++, ITK, CyberTorcs, RobotC, SolidWorks, Javascript, HTML, etc.
Hobbies: physics, robotics competition, csgo (rank Global Elite), , guitar, and cooking.

"The ball I threw while playing in the park      

Has not yet reached the ground."